Package: downscale
Type: Package
Title: Downscaling Species Occupancy
Version: 5.1.3
Date: 2025-09-18
Authors@R: person("Charles", "Marsh", email = "charlie.marsh@mailbox.org", role = c("aut", "cre", "cph"), comment = c(ORCID="0000-0002-0281-3115"))
Maintainer: Charles Marsh <charlie.marsh@mailbox.org>
URL: https://github.com/charliem2003/downscale
Description: Uses species occupancy at coarse grain sizes to predict
        species occupancy at fine grain sizes. Ten models are provided
        to fit and extrapolate the occupancy-area relationship, as well
        as methods for preparing atlas data for modelling. See Marsh
        et. al. (2018) <doi:10.18637/jss.v086.c03>.
License: GPL-2
Depends: R (>= 3.0.0)
Imports: cubature (>= 1.1-2), graphics, grDevices, methods, minpack.lm
        (>= 1.1-9), Rmpfr, stats, sf (>= 1.0-9), terra (>= 1.7-3)
Suggests: rgbif (>= 0.9.2), knitr, rmarkdown, bookdown
Collate: 'checkInputs.R' 'DataInput.R' 'downscale.R' 'OptimisePars.R'
        'OptimiseParsGNB.R' 'OptimiseParsFNB.R' 'OptimiseParsLogis.R'
        'OptimiseParsThomas.R' 'PredictFunctions.R' 'ResidFunctions.R'
        'StartingParams.R' 'ThomasFunctions.R'
        'plot.predict.downscale.R' 'predict.downscale.R'
        'ensemble.downscale.R' 'upgrain.R' 'hui.downscale.R'
        'HuiFunctions.R' 'upgrain.threshold.R' 'zzz.R'
RoxygenNote: 7.2.3
VignetteBuilder: knitr
Config/pak/sysreqs: libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev
        libgmp3-dev make libmpfr-dev libssl-dev libproj-dev
        libsqlite3-dev libudunits2-dev
Repository: https://charliem2003.r-universe.dev
Date/Publication: 2025-09-18 07:31:35 UTC
RemoteUrl: https://github.com/charliem2003/downscale
RemoteRef: HEAD
RemoteSha: 70ad5537e3a2179a17fc20492a8026af5b19e67e
NeedsCompilation: no
Packaged: 2026-10-17 10:30:35 UTC; root
Author: Charles Marsh [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0002-0281-3115>)